| Week 1 | ||
| Introductory lecture |
| Week 2 | ||
| Scoring Matrices | ||
| Jukes-Cantor |
| Week 3 | ||
| Scoring Matrices Derivation |
| Week 4 | ||
| Pairwise Sequence Alignment 1: Optimal methods | ||
| Pairwise Sequence Alignment 2: Heuristic methods (I) |
| Week 5 | ||
| Pairwise Sequence Alignment 2: note on indexing | ||
| Pairwise Sequence Alignment 2: Heuristic methods (II) | ||
| Statistics of Sequence Alignment 1 | ||
| Statistics of Sequence Alignment: Example |
| Week 6 | ||
| Statistics of Sequence Alignment 2 |
| Week 7 | ||
| Multiple Sequence Alignment | ||
| Tree-building Algorithms |
| Week 13 | ||
| Microarray Bioinformatics and Data Mining | ||
| Microarray Practical | Specification |
| Week 14 | ||
| Computational modelling of biological networks |
| Assignment 1 | ||
| Part 1 | Specification | |
| Part 2 | Specification |