BStringViews-constructors     package:Biostrings     R Documentation

_C_o_n_s_t_r_u_c_t_o_r-_l_i_k_e _f_u_n_c_t_i_o_n_s _a_n_d _g_e_n_e_r_i_c_s _f_o_r _B_S_t_r_i_n_g_V_i_e_w_s _o_b_j_e_c_t_s

_D_e_s_c_r_i_p_t_i_o_n:

     [TODO: Put a description here]

_U_s_a_g_e:

       views(subject, first=NA, last=NA)
       adjacentViews(subject, width, gapwidth=0)
       BStringViews(src, subjectClass, sep="")

_A_r_g_u_m_e_n_t_s:

 subject: [TODO] 

   first: [TODO] 

    last: [TODO] 

   width: [TODO] 

gapwidth: [TODO] 

     src: [TODO] 

subjectClass: [TODO] 

     sep: [TODO] 

_D_e_t_a_i_l_s:

     In the code snippets below, 'subject' is a character vector or a
     BString (or DNAString or RNAString) object and 'first', 'last' and
     'width' are numeric vectors.

      'views(subject, first, last)': [TODO: Document me]

      'adjacentViews(subject, width, gapwidth)': [TODO: Document me]

     In the code snippets below, 'src' can be a character vector, a
     connection object, a BString (or DNAString or RNAString) object or
     a BStringViews object, 'subjectClass' is a character-string with
     value '"BString"', '"DNAString"' or '"RNAString"' and 'sep' is a
     character-string.

      'BStringViews(src, subjectClass, sep)': [TODO: Document me]

_A_u_t_h_o_r(_s):

     H. Pages

_S_e_e _A_l_s_o:

     BStringViews-class, BString, DNAString, RNAString

_E_x_a_m_p_l_e_s:

       ## A BStringViews object with 12 views
       v12 <- views(DNAString("TAATAATG"), -2:9, 0:11)