htmlpage              package:annotate              R Documentation

_F_u_n_c_t_i_o_n_s _t_o _b_u_i_l_d _H_T_M_L _p_a_g_e_s

_D_e_s_c_r_i_p_t_i_o_n:

     This function is a modification of 'll.htmlpage', designed to be
     able to create links for more than one set of ids.

_U_s_a_g_e:

     htmlpage(genelist, filename, title, othernames, table.head, table.center = TRUE, repository = "ll")

_A_r_g_u_m_e_n_t_s:

genelist: A list or 'data.frame' of character vectors containing ids to
          be made into hypertext links. See details for more
          information.

filename: A filename for the resultant HTML table. 

   title: A title for the table. 

othernames: A list or 'data.frame' of other things to add to the table.
          These will not be hyperlinks. The list of othernames can
          contain vectors, matrices, 'data.frames' or lists. 

table.head: A character vector of column headers for the table.

table.center: Center the table? Defaults to 'TRUE'. 

repository: A list of repositories to use for creating the hypertext
          links. See details for more information.

_D_e_t_a_i_l_s:

     This is a modification of 'll.htmlpage', which is limited to a
     single column of hyperlinked ids and lists of vectors for
     othernames. This function will accept a list or 'data.frame' of
     character vectors, each containing different ids that are to be
     turned into hyperlinks (e.g., a list containing affy ids, genbank
     accession numbers, and locus link ids). For instances where there
     are more than one id per gene, use a sub-list of character
     vectors. See the vignette 'prettyOutput' for more information.
     Othernames should be a list or 'data.frame'. Again, if there are
     multiple entries for a given gene, use a sub-list.

_V_a_l_u_e:

     This function is used only for the side effect of creating an HTML
     table.

_A_u_t_h_o_r(_s):

     Robert Gentleman <rgentlem@jimmy.harvard.edu>, further
     modifications by James W. MacDonald <jmacdon@med.umich.edu>

_E_x_a_m_p_l_e_s:

     library(annotate)
     gnames <- as.character(6810:6820)
     htmlpage(gnames, "fff.html")
     file.remove("fff.html")