Entry: MTP-class
Aliases: MTP-class
Keywords: classes
Description: Class "MTP", classes and methods for multiple testing procedure output
URL: ../../../library/multtest/html/MTP-class.html

Entry: MTP-methods
Aliases: MTP-methods [-methods [,MTP-method as.list-methods as.list,MTP-method as.list plot-methods plot,MTP-method plot print-methods print,MTP-method print.MTP summary-methods summary,MTP-method summary update-methods update,MTP-method update
Keywords: methods
Description: Methods for MTP objects in Package 'multtest'
URL: ../../../library/multtest/html/MTP-methods.html

Entry: MTP
Aliases: MTP
Keywords: htest
Description: A function to perform resampling-based multiple hypothesis testing
URL: ../../../library/multtest/html/MTP.html

Entry: boot.resample
Aliases: boot.resample
Keywords: manip internal
Description: Non-parametric bootstrap resampling function in package 'multtest'
URL: ../../../library/multtest/html/boot.resample.html

Entry: fwer2gfwer
Aliases: fwer2gfwer fwer2tppfp fwer2fdr
Keywords: htest internal
Description: Function to compute augmentation MTP adjusted p-values
URL: ../../../library/multtest/html/fwer2gfwer.html

Entry: get.index
Aliases: get.index
Keywords: htest internal
Description: Function to compute indices for ordering hypotheses in Package 'multtest'
URL: ../../../library/multtest/html/get.index.html

Entry: golub
Aliases: golub golub.cl golub.gnames
Keywords: datasets
Description: Gene expression dataset from Golub et al. (1999)
URL: ../../../library/multtest/html/golub.html

Entry: meanX
Aliases: meanX diffmeanX FX blockFX lmX lmY coxY get.Tn
Keywords: htest internal
Description: Functions to create test statistic closures and apply them to data
URL: ../../../library/multtest/html/meanX.html

Entry: multtest-internal
Aliases: .mt.BLIM .mt.RandSeed .mt.naNUM mt.number2na mt.na2number mt.getmaxB mt.transformL mt.transformX mt.transformV mt.checkothers mt.checkX mt.checkV mt.checkclasslabel mt.niceres mt.legend
Keywords: internal
Description: Internal multtest functions and variables
URL: ../../../library/multtest/html/mt.internal.html

Entry: mt.maxT
Aliases: mt.maxT mt.minP
Keywords: htest
Description: Step-down maxT and minP multiple testing procedures
URL: ../../../library/multtest/html/mt.maxT.html

Entry: mt.plot
Aliases: mt.plot
Keywords: hplot
Description: Plotting results from multiple testing procedures
URL: ../../../library/multtest/html/mt.plot.html

Entry: mt.rawp2adjp
Aliases: mt.rawp2adjp
Keywords: htest
Description: Adjusted p-values for simple multiple testing procedures
URL: ../../../library/multtest/html/mt.rawp2adjp.html

Entry: mt.reject
Aliases: mt.reject
Keywords: htest
Description: Identity and number of rejected hypotheses
URL: ../../../library/multtest/html/mt.reject.html

Entry: mt.sample.teststat
Aliases: mt.sample.teststat mt.sample.rawp mt.sample.label
Keywords: manip
Description: Permutation distribution of test statistics and raw (unadjusted) p-values
URL: ../../../library/multtest/html/mt.sample.teststat.html

Entry: mt.teststat
Aliases: mt.teststat mt.teststat.num.denum
Keywords: univar
Description: Computing test statistics for each row of a data frame
URL: ../../../library/multtest/html/mt.teststat.html

Entry: ss.maxT
Aliases: ss.maxT ss.minP sd.maxT sd.minP
Keywords: htest internal
Description: Procedures to perform multiple testing
URL: ../../../library/multtest/html/ss.maxT.html

Entry: wapply
Aliases: wapply
Keywords: internal
Description: Weighted version of the apply function
URL: ../../../library/multtest/html/wapply.html