testSnpSetAccessors <- function() { set.seed(1) nms <- list(paste("rs", 1:100, sep="_"), LETTERS[1:10]) m <- matrix(runif(1000), 100, dimnames=nms) n <- matrix(runif(1000), 100, dimnames=nms) sset <- new("SnpSet", call=m, callProbability=n) checkEquals(m, snpCall(sset)) checkEquals(n, snpCallProbability(sset)) m <- matrix(runif(1000), 100, dimnames=nms) n <- matrix(runif(1000), 100, dimnames=nms) snpCall(sset) <- m snpCallProbability(sset) <- n checkEquals(m, snpCall(sset)) checkEquals(n, snpCallProbability(sset)) }