KEGGPATHNAME2ID             package:KEGG             R Documentation

_A_n _a_n_n_o_t_a_t_i_o_n _d_a_t_a _f_i_l_e _t_h_a_t _m_a_p_s _K_E_G_G _p_a_t_h_w_a_y _n_a_m_e_s _t_o
_i_d_e_n_t_i_f_i_e_r_s _f_o_r _t_h_e _c_o_r_r_e_s_p_o_n_d_i_n_g _p_a_t_h_w_a_y _n_a_m_e_s _u_s_e_d _b_y _K_E_G_G

_D_e_s_c_r_i_p_t_i_o_n:

     KEGGPATHNAME2ID maps KEGG pathway names to pathway identifiers
     used by KEGG for various pathways

_D_e_t_a_i_l_s:

     This is an environment object containing key and value pairs. Keys
     are KEGG pathway names and values are pathway identifiers. Values
     are vectors of length 1.  

     Mappings were based on data provided by:

     KEGG:<URL:
     http://gopher5/compbio/annotationSourceData/kegg/pathways/map_titl
     e.tab>. Built: Release 38.1, June 1, 2006  

     Package built: Wed Sep  6 13:12:02 2006

_R_e_f_e_r_e_n_c_e_s:

     <URL: ftp://ftp.genome.ad.jp/pub/kegg/pathways>

_E_x_a_m_p_l_e_s:

             require("annotate") || stop("annotate unavailable")
             xx <- as.list(KEGGPATHNAME2ID)
             if(length(xx) > 0){
                     # get the value for the first key
                     xx[[1]]
                     # Get the values for a few keys
                     if(length(xx) >= 3){
                             xx[1:3]
                     }
             }