allNA allNA Anova Anova anyNA allNA area rowROC-class area,rowROC-method rowROC-class AUC rowROC-class AUC,rowROC-method rowROC-class colFtests rowFtests colFtests,ExpressionSet,character-method rowFtests colFtests,ExpressionSet,factor-method rowFtests colFtests,matrix,factor-method rowFtests colttests rowFtests colttests,ExpressionSet,character-method rowFtests colttests,ExpressionSet,factor-method rowFtests colttests,ExpressionSet,missing-method rowFtests colttests,matrix,factor-method rowFtests colttests,matrix,missing-method rowFtests coxfilter coxfilter cv cv dist2 dist2 eSetFilter eSetFilter fastT rowFtests featureFilter nsFilter filtered_p filtered_p filtered_R filtered_p filterfun filterfun filter_volcano filter_volcano findLargest findLargest gapFilter gapFilter genefilter genefilter genefinder genefinder genefinder,ExpressionSet,vector-method genefinder genefinder,matrix,vector-method genefinder genescale genescale getFilterNames eSetFilter getFuncDesc eSetFilter getRdAsText eSetFilter half.range.mode half.range.mode isESet eSetFilter kappa_p kappa_p kappa_t kappa_p kOverA kOverA maxA maxA nsFilter nsFilter nsFilter,ExpressionSet-method nsFilter parseArgs eSetFilter parseDesc eSetFilter pAUC rowROC-class pAUC,rowROC,numeric-method rowROC-class plot,rowROC,missing-method rowROC-class pOverA pOverA rejection_plot rejection_plot rowFtests rowFtests rowFtests,ExpressionSet,character-method rowFtests rowFtests,ExpressionSet,factor-method rowFtests rowFtests,matrix,factor-method rowFtests rowpAUCs rowpAUCs rowpAUCs,ExpressionSet,ANY-method rowpAUCs rowpAUCs,ExpressionSet,character-method rowpAUCs rowpAUCs,matrix,factor-method rowpAUCs rowpAUCs,matrix,numeric-method rowpAUCs rowpAUCs-methods rowpAUCs rowROC rowROC-class rowROC-class rowROC-class rowSds rowSds rowttests rowFtests rowttests,ExpressionSet,character-method rowFtests rowttests,ExpressionSet,factor-method rowFtests rowttests,ExpressionSet,missing-method rowFtests rowttests,matrix,factor-method rowFtests rowttests,matrix,missing-method rowFtests rowVars rowSds sens rowROC-class sens,rowROC-method rowROC-class setESetArgs eSetFilter shorth shorth show,rowROC-method rowROC-class showESet eSetFilter spec rowROC-class spec,rowROC-method rowROC-class tdata tdata ttest ttest varFilter nsFilter [,rowROC-method rowROC-class