\HeaderA{all.present.in.group}{Filter by PMA call}{all.present.in.group}
\keyword{misc}{all.present.in.group}
\begin{Description}\relax
Filters an object by PMA calls. Must be called present in at leset 'no' elements in at least one of the replicate sets in the factor 'group'
\end{Description}
\begin{Usage}
\begin{verbatim}
  all.present.in.group(x,group,members,calls,no = "all")
\end{verbatim}
\end{Usage}
\begin{Arguments}
\begin{ldescription}
\item[\code{x}] An object to filter 
\item[\code{group}] The factor to filter by 
\item[\code{members}] The members in the group to check. If null, checks all possible ones
\item[\code{calls}] A matrix of PMA calls 
\item[\code{no}] How many in a row to pass the filter? If 'all' then all must be present
\end{ldescription}
\end{Arguments}
\begin{Value}
A probesetid
\end{Value}
\begin{Author}\relax
Crispin J Miller
\end{Author}
\begin{Examples}
\begin{ExampleCode}
  ## Not run: 
     all.present.in.group(eset,calls,"line",dim(calls)[2])
  
## End(Not run)
\end{ExampleCode}
\end{Examples}